CDS

Accession Number TCMCG017C16906
gbkey CDS
Protein Id OMO90669.1
Location complement(join(5026..5120,5416..5535,5699..5838,5974..6092,6189..6368,6466..6659,6865..6986,7152..7309,7450..7572))
GeneID InterPro:IPR004843
Organism Corchorus olitorius
locus_tag COLO4_18967

Protein

Length 416aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01016533.1
Definition hypothetical protein COLO4_18967 [Corchorus olitorius]
Locus_tag COLO4_18967

EGGNOG-MAPPER Annotation

COG_category A
Description Lariat debranching
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K18328        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004519        [VIEW IN EMBL-EBI]
GO:0004521        [VIEW IN EMBL-EBI]
GO:0004540        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0008419        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016891        [VIEW IN EMBL-EBI]
GO:0016893        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0090502        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAAGATAGCAATTGAAGGGTGCATGCATGGAGACCTTGACAAGGTTTACGAAACCATCAAATACATTGAAAATACTCGCAACATCAAAATCGACCTCCTCCTCTGCTGCGGTGACTTCCAGGCAGTTAGGAATGAAAAAGATATGGAGAGTCTTCATGTGCCCCAGAAATATAAGGAGATGAAGTCATTCTGGAAATACTATGCGGGTCTGGAGGTTGCCCCCGTTCCCACCATTTTTATTGGTGGAAATCATGAAGCTTCCAATTATTTGTGGGAATTGTATTATGGGGGATGGGCAGCTCATAACATATACTTCTTGGGATTTGCTGGAGTTGTCAAGTTTGGCAATATCCGTATTGGTGGCCTTTCTGGAATTTACAAGGCATACGACTATCATAAAGGACATCATGAAAGGCCACCTTATAATGAGAAAACTATCAACTCTGTATATCATGTTCGTGAGTATGATGTTCACAAACTCATGCAAGTAAAGGAACCAATCGATATTTTTCTTTCACATGATTGGCCGCTTGGAATTACTGATTGTGGGGATTCGAAGGCACTTGTTCGTCAGAAAAGACATTTTGAAGATGAGATTCAGAAAGGAATTCTTGGAAGCAAGCCTGCTGCTCAGTTGCTCGAAAACCTAAAACCATCTTATTGGTTTTCAGCTCACTTGCACTGCAAATTCTCTGCTCTTGTTCAACATGAAGGTGTGCAAGTGACAAAGTTTCTTGCACTTGATAAGTGCCTTCCAGGGCGCAATTTCTTACAGATTGTTGATATTGAATCGGATCCAGGACCTTATGAACTTCAATATGATGAAGAATGGCTGGCTATAACACGCACATTCAACTGTGTCTTCCCTTTGACCATGAATCATGGAAACTTTAGGAATACACAGCTTGACATGCAAGATTGTCGTCAATGGGTTCGGAACAGGCTGGAAGTTAGAGGAGCCAAACCTTGTGATTTCTCACAAACTGTTCCACCTTACAATCCCTCCCATCCAGATTCTAGCACTACTTTTTCTGGGTGTCCCCGCAATCCTCAGACTGTATCTTTCTTGGAATTGCTGGAGCTTCCATATATTCTTGATAATGCATCACAATCAGGGGAGTTAACAAACAGTCCTGGTCCATTGACTCATAGAGATGATTACAATGAAGACATTCCCATAGATGATGTGGATGAACCAGAGGATGATGCAGAAGTTGATAATACAGAAACCGACAATGACCACCTTTAA
Protein:  
MKIAIEGCMHGDLDKVYETIKYIENTRNIKIDLLLCCGDFQAVRNEKDMESLHVPQKYKEMKSFWKYYAGLEVAPVPTIFIGGNHEASNYLWELYYGGWAAHNIYFLGFAGVVKFGNIRIGGLSGIYKAYDYHKGHHERPPYNEKTINSVYHVREYDVHKLMQVKEPIDIFLSHDWPLGITDCGDSKALVRQKRHFEDEIQKGILGSKPAAQLLENLKPSYWFSAHLHCKFSALVQHEGVQVTKFLALDKCLPGRNFLQIVDIESDPGPYELQYDEEWLAITRTFNCVFPLTMNHGNFRNTQLDMQDCRQWVRNRLEVRGAKPCDFSQTVPPYNPSHPDSSTTFSGCPRNPQTVSFLELLELPYILDNASQSGELTNSPGPLTHRDDYNEDIPIDDVDEPEDDAEVDNTETDNDHL